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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC7A6, solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
Sequence ID:NM_001076785
NM_003983
Entrez Gene ID:9057
Ensembl ID:ENSG00000103064

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 68323989 - 68326660

 Exon Info From UCSC:
NM_001076785
NM_003983

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5214340Full LengthBC028216solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
40076827IncompleteBC113100solute carrier family 7 (cationic amino acid transporter, y+ system), member 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001076785 NP_001070253    
NM_003983 NP_003974 Q92536  

Related Sequences

 
mRNAGenPeptSwissProt
BC028216 AAH28216 Q92536
BC113100 AAI13101 A0AUM0
DQ891023 ABM81949  
DQ894203 ABM85129  
D87432 BAA13376 Q92536
CR749291 CAH18146 Q92536
CR749475 CAH18305 Q68DB5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC7A6 NP_001070253 R.norvegicus Slc7a6 307811   NP_001100894 90
M.musculus Slc7a6 330836 Gene Info NP_848913 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)