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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA6, homeobox A6
Sequence ID:NM_024014
Entrez Gene ID:3203
Ensembl ID:ENSG00000106006

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27185226 - 27187368

NM_024014 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14212718511527185535
4228632718692627187367

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262260Full LengthBC069497homeobox A6
8143918Full LengthBC104915homeobox A6
8143920Full LengthBC104917homeobox A6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076919  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024014 NP_076919 P31267 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC069497 AAH69497 P31267
BC104915 AAI04916 P31267
BC104917 AAI04918 P31267
HQ448389 ADQ32869  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA6 NP_076919 M.musculus Hoxa6 15403 Gene Info NP_034584 97
R.norvegicus Hoxa6 685732   XP_001065038 97
C.elegans lin-39 176068   NP_001021164 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)