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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ST8SIA6, ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
Sequence ID:NM_001004470
Entrez Gene ID:338596
Ensembl ID:ENSG00000148488

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10p12.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 17362876 - 17496254

NM_001004470 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
26701736267617363344
6717631736506317365155
7648761736901217369124
87710211737340617373550
102211081740151217401598
110911981743252917432618
119912971749555717495655
129813981749615317496253

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021099Full LengthBC137102ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
9021100Full LengthBC137103ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004470  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004470 NP_001004470 P61647 Glyco_transf_29

Related Sequences

 
mRNAGenPeptSwissProt
BC137102 AAI37103 P61647
BC137103 AAI37104 P61647
AB062101 BAE94653 Q1HAZ0
AJ621583 CAF21722 P61647

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ST8SIA6 NP_001004470 M.musculus St8sia6 241230 Gene Info NP_665837 83
R.norvegicus St8sia6 291325   NP_998789 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)