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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP13A4, ATPase type 13A4
Sequence ID:NM_032279
Entrez Gene ID:84239
Ensembl ID:ENSG00000127249

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 193157903 - 193272696

 Exon Info From UCSC:
NM_032279

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069002Full LengthBC101496ATPase type 13A4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115655  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032279 NP_115655 Q4VNC1 E1-E2_ATPase
Cation_ATPase_N
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProt
BC101496 AAI01497 Q4VNC1
AY358110 AAQ88477 Q4VNC1
AY823162 AAX24102 Q4VNC1
AK095277 BAC04520 Q4VNC1
AK096510 BAG53309 B3KU47
AL512736 CAC21667 Q4VNC1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP13A4 NP_115655 M.musculus Atp13a4 224079 Gene Info NP_001158084 88
R.norvegicus Atp13a4 288026   XP_221355 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)