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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H2BN, histone cluster 1, H2bn
Sequence ID:NM_003520
Entrez Gene ID:8341
Ensembl ID:ENSG00000233822

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 27806439 - 27806870

NM_003520 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14482780643927806886

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40021691Full LengthBC101411histone cluster 1, H2bn
40021693Full LengthBC101412histone cluster 1, H2bn
40021695Full LengthBC101413histone cluster 1, H2bn

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003511  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003520 NP_003511 Q99877 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC101411 AAI01412 Q99877
BC101412 AAI01413 Q99877
BC101413 AAI01414 Q99877
DQ891028 ABM81954  
DQ894207 ABM85133  
AK312228 BAG35161 Q99877

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H2BN NP_003511 R.norvegicus Hist1h2bh 306945   NP_001100822 99
R.norvegicus Hist1h2bcl1 680403   XP_001057044 99
M.musculus Hist1h2br 665622 Gene Info NP_001104025 98
M.musculus Hist1h2bq 665596   NP_001091448 98
D.melanogaster His2B:CG33902 3772058   NP_001027300 87
D.melanogaster His2B:CG33898 3772248   NP_001027310 87
D.melanogaster His2B:CG33892 3772166   NP_001027325 87
D.melanogaster His2B:CG33886 3772271   NP_001027340 87
D.melanogaster His2B:CG17949 326273   NP_724342 87
D.melanogaster His2B:CG33868 3772265   NP_001027385 87
D.melanogaster His2B:CG33884 3772575   NP_001027345 87
D.melanogaster His2B:CG33874 3772264   NP_001027370 87
D.melanogaster His2B:CG33906 3772013   NP_001027291 87
D.melanogaster His2B:CG33896 3771957   NP_001027315 87
D.melanogaster His2B:CG33894 3772502   NP_001027320 87
D.melanogaster His2B:CG33890 3772336   NP_001027330 87
D.melanogaster His2B:CG33900 3772094   NP_001027305 87
D.melanogaster His2B:CG33876 3772083   NP_001027365 87
D.melanogaster His2B:CG33878 3771891   NP_001027360 87
D.melanogaster His2B:CG33904 3772203   NP_001027296 87
D.melanogaster His2B:CG33908 3772099   NP_001027287 87
D.melanogaster His2B:CG33880 3772496   NP_001027355 87
D.melanogaster His2B:CG33870 3772081   NP_001027380 87
D.melanogaster His2B:CG33910 3772299   NP_001027283 87
D.melanogaster His2B:CG33888 3772104   NP_001027335 87
D.melanogaster His2B:CG33872 3771809   NP_001027375 87
D.melanogaster His2B:CG33882 3772276   NP_001027350 87
A.gambiae H2B_ANOGA_c 1280483   XP_320329 82
A.gambiae AgaP_AGAP012894 1267698   XP_306255 82
A.gambiae AgaP_AGAP012710 1268522   XP_307082 82
A.gambiae H2B_ANOGA_d 4577811   XP_001238300 82
A.gambiae H2B_ANOGA_e 1280488   XP_320334 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)