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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRDM5, PR domain containing 5
Sequence ID:NM_018699
RefSeqGene ID:NG_031862
Entrez Gene ID:11107
Ensembl ID:ENSG00000138738

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q25-q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 121843096 - 121844760

 Exon Info From UCSC:
NM_018699

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117856Full LengthBC121037PR domain containing 5
40117857Full LengthBC121038PR domain containing 5
4137157IncompleteBC030136PR domain containing 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018699 NP_061169 Q9NQX1  

Related Sequences

 
mRNAGenPeptSwissProt
AF272897 AAF78077 Q9NQX1
BC066942 AAH66942 Q9NQX1
BC121037 AAI21038 Q9NQX1
BC121038 AAI21039 Q0VAI9
AK056352 BAG51686 Q9NQX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRDM5 NP_061169 M.musculus Prdm5 70779 Gene Info NP_081823 93
R.norvegicus Prdm5 689788   XP_001072014 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)