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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLX4IP, SLX4 interacting protein
Sequence ID:NM_001009608
Entrez Gene ID:128710
Ensembl ID:ENSG00000149346

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 10415950 - 10603996

NM_001009608 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11511041595010416100
1522071043882310438878
2082971053687810536967
2984181054134710541467
4194961057932210579399
4975851058237810582466
5866861060196110602061
68714051060330610604024

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4807023IncompleteBC026094chromosome 20 open reading frame 94
4840139IncompleteBC020787chromosome 20 open reading frame 94

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001009608 NP_001009608 Q5VYV7  

Related Sequences

 
mRNAGenPeptSwissProt
BC020787 AAH20787 Q5VYV7
BC026094 AAH26094 Q5VYV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C20orf94 NP_001009608 M.musculus 2210009G21Rik 74243 Gene Info NP_083110 71
R.norvegicus RGD1563120 499895   XP_575241 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)