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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEC16A, SEC16 homolog A (S. cerevisiae)
Sequence ID:NM_014866
Entrez Gene ID:9919
Ensembl ID:ENSG00000148396

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 139334558 - 139338169

 Exon Info From UCSC:
NM_014866

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3139772IncompleteBC001404SEC16 homolog A (S. cerevisiae)
3505732IncompleteBC008332SEC16 homolog A (S. cerevisiae)
3505814IncompleteBC051290KIAA0310
3884106IncompleteBC016873SEC16 homolog A (S. cerevisiae)
4508322IncompleteBC028183SEC16 homolog A (S. cerevisiae)
6019850IncompleteBC040710KIAA0310
6044493IncompleteBC070488KIAA0310
6429542IncompleteBC098454SEC16 homolog A (S. cerevisiae)
40072120IncompleteBC125018SEC16 homolog A (S. cerevisiae)
40072123IncompleteBC125019SEC16 homolog A (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014866 NP_055681    

Related Sequences

 
mRNAGenPeptSwissProt
BC001404 AAH01404 Q9BV84
BC008332 AAH08332 O15027
BC016873 AAH16873 A0PJ75
BC028183 AAH28183 O15027
BC098454 AAH98454 O15027
BC125018 AAI25019 A4QN18
BC125019 AAI25020 A4QN19
DQ903855 ABI78944 O15027
AB002308 BAA20769 O15027
AK094756 BAC04415 Q8N9G1
AK074565 BAC11063 Q8N2P2
AK130247 BAC85312 Q6ZP13
AK301371 BAG62913 B4DW51
AK302210 BAG63568 B4DY06
AK316194 BAH14565 B4DW51
AB593115 BAJ84055 F1T0I1
AB621812 BAK64148 G1UI25

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEC16A NP_055681 M.musculus Sec16a 227648 Gene Info NP_694765 72
R.norvegicus LOC100360302 100360302   XP_002729192 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)