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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXB13, homeobox B13
Sequence ID:NM_006361
Entrez Gene ID:10481
Ensembl ID:ENSG00000159184

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46804001 - 46806055

NM_006361 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1422904680212846804404
229130474680535446806110

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4250486Full LengthBC007092homeobox B13
6668163Full LengthBC070233homeobox B13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006352  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006361 NP_006352 Q92826 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U81599 AAB39863 Q92826
U57052 AAC50664 Q92826
BC007092 AAH07092 Q92826
BC070233 AAH70233 Q92826
BT007410 AAP36078 Q92826
AY937237 AAY17396 Q4KR72
DQ893517 ABM84443  
DQ896496 ABM87495  
AK313266 BAG36075 Q92826

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXB13 NP_006352 M.musculus Hoxb13 15408 Gene Info NP_032293 94
R.norvegicus Hoxb13 303480   NP_001100511 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)