Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VAMP3, vesicle-associated membrane protein 3
Sequence ID:NM_004781
Entrez Gene ID:9341
Ensembl ID:ENSG00000049245

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 7831336 - 7839705

NM_004781 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111778313287831444
11818778335017833570
18834678372197837377
34739878381777838228
399220478396857841490

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3544610Full LengthBC003570vesicle-associated membrane protein 3 (cellubrevin)
3681914Full LengthBC007050vesicle-associated membrane protein 3 (cellubrevin)
4069433Full LengthBC005941vesicle-associated membrane protein 3 (cellubrevin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004772  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004781 NP_004772 Q6FGG2
Q15836
Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
U64520 AAB05814 Q6FGG2
Q15836
BC003570 AAH03570 Q6FGG2
Q15836
BC005941 AAH05941 Q9BRV4
BC007050 AAH07050 Q6FGG2
Q15836
BT007327 AAP35991 Q6FGG2
Q15836
AK316558 BAG38147 Q6FGG2
CR542145 CAG46942 Q6FGG2
Q15836
CR542154 CAG46951 Q6FGG2
Q15836

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VAMP3 NP_004772 M.musculus Vamp3 22319 Gene Info NP_033524 93
R.norvegicus Vamp3 29528   NP_476438 93
C.elegans snb-1 266648   NP_504688 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)