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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ERAP1, endoplasmic reticulum aminopeptidase 1
Sequence ID:NM_001040458
NM_001198541
NM_016442
RefSeqGene ID:NG_027839
Entrez Gene ID:51752
Ensembl ID:ENSG00000164307

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 96095243 - 96139648

 Exon Info From UCSC:
NM_001040458
NM_016442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4824919Full LengthBC030775endoplasmic reticulum aminopeptidase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057526  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040458 NP_001035548 Q9NZ08  
NM_001198541 NP_001185470    
NM_016442 NP_057526   Peptidase_M1

Related Sequences

 
mRNAGenPeptSwissProt
AF106037 AAF07395 Q9NZ08
AF183569 AAF20384 Q9NZ08
AF222340 AAF34664 Q9NZ08
BC030775 AAH30775 Q9NZ08
AY028806 AAK37777 Q9NZ08
AY028807 AAK37778 Q9NZ08
AY358590 AAQ88953 Q9NZ08
AB011097 BAA25451 Q9NZ08
AK222873 BAD96593 Q53GQ8
AK291636 BAF84325 A8K6H1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ERAP1 NP_057526 M.musculus Erap1 80898 Gene Info NP_109636 86
R.norvegicus Erap1 80897   NP_110463 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)