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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL8B, ADP-ribosylation factor-like 8B
Sequence ID:NM_018184
Entrez Gene ID:55207
Ensembl ID:ENSG00000134108

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 5164150 - 5220398

NM_018184 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
134451639295164272
34542552121875212267
42649952138345213907
50059352143315214424
59466152157015215768
66273252160285216098
733298352203485222598

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4508077Full LengthBC013131ADP-ribosylation factor-like 8B
6622791Full LengthBC063125ADP-ribosylation factor-like 8B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060654  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018184 NP_060654 Q9NVJ2 Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC013131 AAH13131 Q9NVJ2
BC063125 AAH63125 Q9NVJ2
AK001564 BAA91759 Q9NVJ2
AB118751 BAD23992 Q9NVJ2
AK295465 BAG58397 B4DI85
AK298951 BAG61050 B4DQT8
AK303872 BAG64810 B4E1J8
CR457264 CAG33545 Q9NVJ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL8B NP_060654 M.musculus Arl8b 67166 Gene Info NP_080287 100
R.norvegicus Arl8b 500282   NP_001019503 100
A.thaliana ARLA1A 833747   NP_568553 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)