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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. FOXN1, forkhead box N1
Sequence ID:NM_003593
RefSeqGene ID:NG_007260
Entrez Gene ID:8456
Ensembl ID:ENSG00000109101

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 26833277 - 26864454

NM_003593 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11522685095826851109
1536172685152026851984
6187282685426826854378
7298592685611126856241
8609562685776626857862
95711642686134826861555
116516562686172426862215
165726952686413426865172

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014910Full LengthBC146539forkhead box N1
100014442BC140423forkhead box N1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003584  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003593 NP_003584 O15353 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC140423 AAI40424  
BC146539 AAI46540  
AK313878 BAG36604 O15353
Y11739 CAA72416 O15353

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXN1 NP_003584 M.musculus Foxn1 15218 Gene Info NP_032264 86
R.norvegicus Foxn1 287469   NP_001094118 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)