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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. EFCAB5, EF-hand calcium binding domain 5
Sequence ID:NM_198529
NM_001145053
Entrez Gene ID:374786
Ensembl ID:ENSG00000176927

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 28296200 - 28435469

 Exon Info From UCSC:
NM_198529
NM_001145053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021519Full LengthBC137519EF-hand calcium binding domain 5
40028872IncompleteBC110608EF-hand calcium binding domain 5
40028873IncompleteBC110609EF-hand calcium binding domain 5
40028880IncompleteBC119807EF-hand calcium binding domain 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145053 NP_001138525    
NM_198529 NP_940931    

Related Sequences

 
mRNAGenPeptSwissProt
BC110608 AAI10609 A4FU69
BC110609 AAI10610 A4FU69
BC119807 AAI19808 A4FU69
BC137519 AAI37520 A4FU69
AK128126 BAC87284 A4FU69
AK299608 BAG61537 B4DS75
AK302745 BAG63959 B4DZ47
AK303060 BAG64177 B4DZR5
AL833911 CAD38767 A4FU69

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EFCAB5 NP_940931 R.norvegicus Efcab5 363653   XP_343944 68
M.musculus Efcab5 319634 Gene Info NP_795939 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)