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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MCFD2, multiple coagulation factor deficiency 2
Sequence ID:NM_001171506
NM_001171507
NM_001171508
NM_001171509
NM_001171510
NM_001171511
NM_139279
RefSeqGene ID:NG_016428
Entrez Gene ID:90411
Ensembl ID:ENSG00000180398

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
COMBINED FACTOR V AND VIII DEFICIENCYLMAN1

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 47132305 - 47142899

 Exon Info From UCSC:
NM_001171506
NM_001171507
NM_001171508
NM_001171509
NM_001171510
NM_001171511
NM_139279

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3925166Full LengthBC040357multiple coagulation factor deficiency 2
4815069Full LengthBC037845multiple coagulation factor deficiency 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171506 NP_001164977    
NM_001171507 NP_001164978    
NM_001171508 NP_001164979    
NM_001171509 NP_001164980    
NM_001171510 NP_001164981    
NM_001171511 NP_001164982    
NM_139279 NP_644808 Q8NI22  

Related Sequences

 
mRNAGenPeptSwissProt
BC037845 AAH37845 Q8NI22
BC040357 AAH40357 Q8NI22
AF475284 AAM28465 Q8NI22
AF537214 AAP23162 Q8NI22
DQ891104 ABM82030  
DQ894285 ABM85211  
AK292127 BAF84816 Q8NI22
AK293889 BAG57278 B4DF17
AL833900 CAD38756 Q8NI22
CR749562 CAH18359 Q8NI22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MCFD2 NP_001164977 R.norvegicus Mcfd2 246117   NP_640346 86
M.musculus Mcfd2 193813 Gene Info NP_647456 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)