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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PKHD1, polycystic kidney and hepatic disease 1 (autosomal recessive)
Sequence ID:NM_138694
NM_170724
RefSeqGene ID:NG_008753
Entrez Gene ID:5314
Ensembl ID:ENSG00000170927

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
POLYCYSTIC KIDNEY AND HEPATIC DISEASE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 51483704 - 51952369

 Exon Info From UCSC:
NM_138694
NM_170724

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619639  NP_733842  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138694 NP_619639 P08F94 TIG
NM_170724 NP_733842   TIG

Related Sequences

 
mRNAGenPeptSwissProt
AY074797 AAL74290 P08F94
AY092083 AAM18186 P08F94
AF480064 AAM44232 P08F94
AK091971 BAC03782 Q8NAW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PKHD1 NP_619639 M.musculus Pkhd1 241035 Gene Info NP_694819 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)