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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NTHL1, nth endonuclease III-like 1 (E. coli)
Sequence ID:NM_002528
RefSeqGene ID:NG_008412
Entrez Gene ID:4913
Ensembl ID:ENSG00000065057

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 2089821 - 2097834

NM_002528 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
123320898152090047
23433920901332090238
34049920935672093726
50067020946302094800
67190920961282096366
910106720977092097866

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821314Full LengthBC003014nth endonuclease III-like 1 (E. coli)
2821314IncompleteBC000391nth endonuclease III-like 1 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002519  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002528 NP_002519 P78549 EC 4.2.99.18 HHH
HhH-GPD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U79718 AAB41534 P78549 EC 4.2.99.18
U81285 AAC51136 P78549 EC 4.2.99.18
BC000391 AAH00391 P78549 EC 4.2.99.18
BC003014 AAH03014 P78549 EC 4.2.99.18
AB001575 BAA19413 P78549 EC 4.2.99.18
Y09687 CAA70865 P78549 EC 4.2.99.18

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NTHL1 NP_002519 M.musculus Nthl1 18207 Gene Info NP_032769 82
R.norvegicus Nthl1 29541   NP_001099198 82
A.gambiae AgaP_AGAP002388 1273573   XP_312566 54
A.thaliana ATNTH1 817703   NP_001077988 53
C.elegans nth-1 187770   NP_497859 52
D.melanogaster CG9272 35365   NP_610078 51
S.pombe nth1 2543510   NP_593210 50
N.crassa NCU06654 3876847   XP_960699 48
A.thaliana NTH2 837100   NP_973767 47
S.cerevisiae NTG2 854114   NP_014599 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)