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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRIM72, tripartite motif containing 72
Sequence ID:NM_001008274
Entrez Gene ID:493829
Ensembl ID:ENSG00000177238

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 31226330 - 31237830

NM_001008274 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12773122534131225617
2786743122605231226448
6757703123041531230510
77110013123060931230839
100210243123221631232238
102511433123414731234265
114421523123550131236509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4906353Full LengthBC033211tripartite motif-containing 72

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008275  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008274 NP_001008275 Q6ZMU5 zf-C3HC4
SPRY
zf-B_box

Related Sequences

 
mRNAGenPeptSwissProt
BC033211 AAH33211 Q6ZMU5
AK090695 BAC03506 Q6ZMU5
AK131485 BAD18630 Q6ZMU5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM72 NP_001008275 R.norvegicus Trim72 365377   NP_001071143 91
M.musculus Trim72 434246 Gene Info NP_001073401 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)