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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SMYD2, SET and MYND domain containing 2
Sequence ID:NM_020197
Entrez Gene ID:56950
Ensembl ID:ENSG00000143499

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 214510239 - 214512117

 Exon Info From UCSC:
NM_020197

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826617Full LengthBC049367SET and MYND domain containing 2
40005280Full LengthBC098335SET and MYND domain containing 2
40005281Full LengthBC098133SET and MYND domain containing 2
40005283Full LengthBC098276SET and MYND domain containing 2
40005284Full LengthBC098305SET and MYND domain containing 2
3848215IncompleteBC017080SET and MYND domain containing 2
5198510IncompleteBC039890SET and MYND domain containing 2
5246939IncompleteBC028104SET and MYND domain containing 2
30342191IncompleteBC068511SET and MYND domain containing 2

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020197 NP_064582 Q9NRG4 EC 2.1.1.43  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF226053 AAF86953 Q9NRG4 EC 2.1.1.43
BC017080 AAH17080 Q9NRG4 EC 2.1.1.43
BC028104 AAH28104 Q05C86  
BC049367 AAH49367 I6L9D1  
BC098133 AAH98133 Q9NRG4 EC 2.1.1.43
BC098276 AAH98276 Q9NRG4 EC 2.1.1.43
BC098305 AAH98305 I6L9H7  
BC098335 AAH98335 Q9NRG4 EC 2.1.1.43
AK313868 BAG36596 Q9NRG4 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMYD2 NP_064582 R.norvegicus Smyd2 289372   NP_996733 94
M.musculus Smyd2 226830 Gene Info NP_081072 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)