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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MACROD2, MACRO domain containing 2
Sequence ID:NM_001033087
NM_080676
Entrez Gene ID:140733
Ensembl ID:ENSG00000172264

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 15680500 - 16033839

 Exon Info From UCSC:
NM_001033087
NM_080676

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4717477Full LengthBC018687MACRO domain containing 2
4513167IncompleteBC035876chromosome 20 open reading frame 133
5265436IncompleteBC036403chromosome 20 open reading frame 133
40022083IncompleteBC101216MACRO domain containing 2
40022084IncompleteBC101217MACRO domain containing 2
40022086IncompleteBC101218MACRO domain containing 2
40022087IncompleteBC126936MACRO domain containing 2
40022093IncompleteBC101219MACRO domain containing 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033087 NP_001028259    
NM_080676 NP_542407    

Related Sequences

 
mRNAGenPeptSwissProt
BC018687 AAH18687 A1Z1Q3
EF159161 ABM46908 A1Z1Q3
AK131348 BAD18504 A1Z1Q3
AK125899 BAG54262 A1Z1Q3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MACROD2 NP_542407 M.musculus Macrod2 72899 Gene Info NP_001013824 82
R.norvegicus Macrod2 685695   XP_002729284 81
A.thaliana AT2G40600 818655   NP_030605 50
C.elegans B0035.3 178044   NP_502127 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)