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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTRA4, HtrA serine peptidase 4
Sequence ID:NM_153692
Entrez Gene ID:203100
Ensembl ID:ENSG00000169495

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 38831696 - 38845644

NM_153692 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15813883166738832247
5826813883254938832648
6828863883405338834257
88710813883547138835665
108211143883673338836765
111512293883917138839285
123012873884001638840073
128813833884047138840566
138421033884545438846173

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30348811Full LengthBC057765HtrA serine peptidase 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_710159  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153692 NP_710159 P83105 Trypsin
PDZ
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
BC057765 AAH57765 P83105
AK075205 BAC11470 P83105
AK300197 BAG61969 B4DTF7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTRA4 NP_710159 M.musculus Htra4 330723 Gene Info NP_001074656 68
R.norvegicus Htra4 306564   NP_001100791 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)