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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PUS3, pseudouridylate synthase 3
Sequence ID:NM_031307
Entrez Gene ID:83480
Ensembl ID:ENSG00000110060

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 125763381 - 125766209

NM_031307 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19820125763379125764180
8211386125765118125765683
13871810125765801125766224
18111862125773064125773115

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3451112Full LengthBC004822pseudouridylate synthase 3
3896889IncompleteBC013427pseudouridylate synthase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112597  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031307 NP_112597   PseudoU_synth_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF325689 AAG50280 Q9BZE2 EC 5.4.99.45
BC004822 AAH04822 Q9BZE2 EC 5.4.99.45
BC013427 AAH13427 Q9BZE2 EC 5.4.99.45
DQ896653 ABM87652    
DQ896654 ABM87653    
EU176796 ABW03597    
EU176455 ABW03906    
AK055702 BAB70990 Q9BZE2 EC 5.4.99.45
AK314251 BAG36917 Q9BZE2 EC 5.4.99.45

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PUS3 NP_112597 M.musculus Pus3 67049 Gene Info NP_075781 86
R.norvegicus Pus3 315554   NP_001101604 84
A.gambiae AgaP_AGAP010807 1278855   XP_318500 49
S.pombe SPAC25B8.05 2541578   NP_594465 49
S.cerevisiae DEG1 850550   NP_116655 47
D.melanogaster CG3045 37531   NP_611646 45
A.thaliana AT1G34150 840314   NP_564438 43
C.elegans tag-124 174509   NP_496062 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)