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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NTN1, netrin 1
Sequence ID:NM_004822
Entrez Gene ID:9423
Ensembl ID:ENSG00000065320

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13-p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 9144263 - 9147317

NM_004822 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14489248588924901
45112589256278926707
1126131490661299066317
1315146490831239083272
1465151890862329086285
1519159391244849124558
1594595391429569147315

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004813  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004822 NP_004813 O95631 Laminin_EGF
Laminin_N
NTR

Related Sequences

 
mRNAGenPeptSwissProt
U75586 AAD09221 O95631
GU727649 ADU87650 O95631

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NTN1 NP_004813 R.norvegicus Ntn1 114523   NP_446183 99
M.musculus Ntn1 18208 Gene Info NP_032770 99
D.melanogaster NetB 32400   NP_001162753 57
C.elegans unc-6 180961   NP_509165 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)