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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCYT1B, phosphate cytidylyltransferase 1, choline, beta
Sequence ID:NM_001163264
NM_001163265
NM_004845
RefSeqGene ID:NG_013253
Entrez Gene ID:9468
Ensembl ID:ENSG00000102230

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 24579958 - 24665275

 Exon Info From UCSC:
NM_001163264
NM_001163265
NM_004845

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5285137Full LengthBC045634phosphate cytidylyltransferase 1, choline, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004836  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001163264 NP_001156736      
NM_001163265 NP_001156737      
NM_004845 NP_004836 Q9Y5K3 EC 2.7.7.15 CTP_transf_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF052510 AAC39754 Q9Y5K3 EC 2.7.7.15
AF148464 AAD35088 Q9Y5K3 EC 2.7.7.15
BC045634 AAH45634 Q9Y5K3 EC 2.7.7.15
AK315323 BAG37725 Q9Y5K3 EC 2.7.7.15
AK296333 BAG59022 B4DK10  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCYT1B NP_004836 R.norvegicus Pcyt1b 286936   NP_775174 99
M.musculus Pcyt1b 236899 Gene Info NP_997593 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)