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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNTNAP5, Contactin associated protein-like 5
Sequence ID:NM_130773
Entrez Gene ID:129684
Ensembl ID:ENSG00000155052

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 124783227 - 125672863

 Exon Info From UCSC:
NM_130773

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015358BC148397contactin associated protein-like 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_570129  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_130773 NP_570129 Q8WYK1 EGF
F5_F8_type_C
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
BC148397 AAI48398  
AK056528 BAB71205 Q8WYK1
AB077881 BAB83897 Q8WYK1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNTNAP5 NP_570129 M.musculus Cntnap5a 636808 Gene Info NP_001070893 85
R.norvegicus Cntnap5a 297832   NP_001041330 82
C.elegans nlr-1 178167   NP_502312 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)