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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EXOSC6, exosome component 6
Sequence ID:NM_058219
Entrez Gene ID:118460
Ensembl ID:ENSG00000223496

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 70284133 - 70285833

NM_058219 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3017297028413370285832

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6256140Full LengthBC052252exosome component 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_478126  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_058219 NP_478126 Q5RKV6 RNase_PH

Related Sequences

 
mRNAGenPeptSwissProt
BC052252 AAH52252 Q5RKV6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EXOSC6 NP_478126 M.musculus Exosc6 72544 Gene Info NP_082550 92
R.norvegicus Exosc6 307850   XP_226471 92
A.gambiae AgaP_AGAP011906 3291448   XP_552338 40
D.melanogaster Mtr3 40173   NP_649157 36
A.thaliana AT4G27490 828858   NP_194479 34
N.crassa NCU08026 3878862   XP_962696 34
S.pombe SPBC211.08c 2540412   NP_596618 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)