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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MAP1S, microtubule-associated protein 1S
Sequence ID:NM_018174
Entrez Gene ID:55201
Ensembl ID:ENSG00000130479

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 17837130 - 17845315

NM_018174 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11271783030217830428
1282291783174417831845
2303121783493417835016
3134531783585717835997
45427971783663717838980
279830331784400117844236
303432761784508117845323

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5925583Full LengthBC080547microtubule-associated protein 1S
40027183Full LengthBC113952microtubule-associated protein 1S
3027801IncompleteBC007253microtubule-associated protein 1S
3945773IncompleteBC008806microtubule-associated protein 1S
4125792IncompleteBC006358microtubule-associated protein 1S
5768192IncompleteBC067115microtubule-associated protein 1S

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018174 NP_060644 Q66K74  

Related Sequences

 
mRNAGenPeptSwissProt
BC006358 AAH06358 Q66K74
BC007253 AAH07253 Q66K74
BC008806 AAH08806 Q66K74
BC067115 AAH67115 Q66K74
BC080547 AAH80547 Q66K74
BC113952 AAI13953 Q66K74
DQ387861 ABD47682 Q66K74
AK001531 BAA91743 Q66K74
AK023118 BAB14415 Q66K74
AK027623 BAB55242 Q66K74
AB062430 BAB93493 Q66K74
AK292555 BAF85244 A8K940
AK294936 BAG58014 B4DH53
AJ440784 CAD29574 Q66K74
AL834233 CAD38911 Q66K74

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAP1S NP_060644 R.norvegicus Map1s 290640   NP_001099540 73
M.musculus Mtap1s 270058 Gene Info NP_766601 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)