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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRIN3B, glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
Sequence ID:XM_003403700
NM_138690
Entrez Gene ID:116444
Ensembl ID:ENSG00000116032

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 1000417 - 1009645

NM_138690 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
142610004361000861
427101910031281003720
1020205210045191005551
2053219810076261007771
2199231410078541007969
2315246610081381008289
2467263110086161008780
2632270210088551008925
2703325410091711009722

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100061980BC156390glutamate receptor, ionotropic, N-methyl-D-aspartate 3B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619635  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138690 NP_619635 O60391 Lig_chan

Related Sequences

 
mRNAGenPeptSwissProt
BC156390 AAI56391 O60391
AY507106 AAS87020 Q5F0I5
AY507107 AAS87021 Q5F0I4
BK000070 DAA00018 O60391
BK004079 DAA04570 O60391
XM_003403700 XP_003403748  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRIN3B NP_619635 M.musculus Grin3b 170483 Gene Info NP_569722 80
R.norvegicus Grin3b 170796   NP_579842 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)