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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRRX2, paired related homeobox 2
Sequence ID:NM_016307
Entrez Gene ID:51450
Ensembl ID:ENSG00000167157

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 132428116 - 132484949

NM_016307 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1486132427919132428404
487674132481509132481696
675853132482874132483052
8541307132484495132484948

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4553935Full LengthBC014645paired related homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057391  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016307 NP_057391 Q99811 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
U81600 AAB39864 Q99811
AF061970 AAF17708 Q99811
BC014645 AAH14645 Q99811

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRRX2 NP_057391 M.musculus Prrx2 20204 Gene Info NP_033142 93
R.norvegicus Prrx2 113931   NP_001099209 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)