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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RRP15, Ribosomal RNA processing 15 homolog (S. cerevisiae)
Sequence ID:NM_016052
Entrez Gene ID:51018
Ensembl ID:ENSG00000067533

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q41Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 218505706 - 218511323

NM_016052 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1169218458628218458796
170435218475635218475900
436533218478369218478466
534735218480772218480973
7367769218504289218511322

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4772128Full LengthBC020641ribosomal RNA processing 15 homolog (S. cerevisiae)
3950114IncompleteBC003668ribosomal RNA processing 15 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057136  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016052 NP_057136 Q9Y3B9 Rrp15p

Related Sequences

 
mRNAGenPeptSwissProt
AF151873 AAD34110 Q9Y3B9
BC003668 AAH03668 A0JLN3
BC020641 AAH20641 Q9Y3B9
AK290066 BAF82755 A8K201

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RRP15 NP_057136 M.musculus Rrp15 67223 Gene Info NP_080317 76
R.norvegicus Rrp15 360895   NP_001009702 75
A.gambiae AgaP_AGAP003041 1272909   XP_311834 40
D.melanogaster CG3817 41805   NP_650405 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)