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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL27, ribosomal protein L27
Sequence ID:NM_000988
Entrez Gene ID:6155
Ensembl ID:ENSG00000131469

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 71508651 - 71518516

NM_000988 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1434115044541150487
441264115076541150847
1272964115194941152118
2974074115468941154799
4084844115488841154964

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3050183Full LengthBC001700ribosomal protein L27
3161124Full LengthBC007273ribosomal protein L27
3161438Full LengthBC002588ribosomal protein L27
3354227Full LengthBC010026ribosomal protein L27
30415908Full LengthBC098560ribosomal protein L27
3445930IncompleteBC021886ribosomal protein L27

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008892  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000988 NP_000979 P61353 KOW
Ribosomal_L27e
NM_006961 NP_008892 P17023 zf-C2H2
TFIIS_C
XPA_N
KRAB
DUF1610

Related Sequences

 
mRNAGenPeptSwissProt
L19527 AAA19815 P61353
U25752 AAA93226 Q6LCU2
L05094 AAC15857 P61353
BC001700 AAH01700 P61353
BC002588 AAH02588 P61353
BC007273 AAH07273 P61353
BC010026 AAH10026 P61353
BC047091 AAH47091 P17023
BC098560 AAH98560 P61353
DQ892563 ABM83489  
DQ895779 ABM86705  
HQ448475 ADQ32955  
AK055567 BAB70957 P17023
AK057330 BAB71430 P17023
AK292260 BAF84949 P17023
AK311792 BAG34735 B2R4D8
X52343 CAA36569 P17023
AL834237 CAD38915 P17023

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL27 NP_000979 M.musculus Rpl27 19942 Gene Info NP_035419 100
M.musculus Gm11518 100039431   XP_001473243 100
R.norvegicus Rpl27 64306   NP_071959 100
C.elegans rpl-27 171750   NP_490905 69
A.gambiae AgaP_AGAP011687 3291409   XP_552567 67
D.melanogaster RpL27 43103   NP_651417 63
A.thaliana AT2G32220 817781   NP_180781 58
A.thaliana AT4G15000 827159   NP_193236 56
A.thaliana AT3G22230 821787   NP_188862 56
S.cerevisiae RPL27A 856401   NP_011874 56
S.cerevisiae RPL27B 852082   NP_010759 56
S.pombe rpl2702 2539336   NP_588378 52
S.pombe rpl2701 2541156   NP_596141 51
N.crassa NCU01827 3872758   XP_956611 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)