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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT71, keratin 71
Sequence ID:NM_033448
RefSeqGene ID:NG_012426
Entrez Gene ID:112802
Ensembl ID:ENSG00000139648

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 52937692 - 52946903

NM_033448 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
208535293769352938526
8548885293934852939382
88911095294006952940289
111012355294164052941765
123614005294193552942099
140114965294248452942579
149715575294307652943136
155817725294381252944026
177322835294642052946930

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40006780Full LengthBC103917keratin 71
40006781Full LengthBC103918keratin 71

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_258259  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033448 NP_258259 Q3SY84 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC103917 AAI03918 Q3SY84
BC103918 AAI03919 Q3SY84
EU832765 ACE87776  
GQ129308 ACT64442  
AK122795 BAG53733 Q3SY84
AJ308599 CAC43429 Q3SY84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT71 NP_258259 M.musculus Krt71 56735 Gene Info NP_064340 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)