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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASIP, agouti signaling protein
Sequence ID:NM_001672
RefSeqGene ID:NG_011439
Entrez Gene ID:434
Ensembl ID:ENSG00000101440

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
[SKIN/HAIR/EYE PIGMENTATION 9, BROWN/NONBROWN EYES] 

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.2-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 32782374 - 32782566

NM_001672 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11703284817032848339
1712323285063732850698
2335843285679632857147

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40033052Full LengthBC104238agouti signaling protein, nonagouti homolog (mouse)
40033056Full LengthBC104239agouti signaling protein, nonagouti homolog (mouse)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001663  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001672 NP_001663 P42127 Agouti

Related Sequences

 
mRNAGenPeptSwissProt
BC104238 AAI04239 P42127
BC104239 AAI04240 P42127

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASIP NP_001663 M.musculus a 50518 Gene Info NP_056585 81
R.norvegicus Asip 24152   NP_443211 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)