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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNR, Tenascin R
Sequence ID:NM_003285
Entrez Gene ID:7143
Ensembl ID:ENSG00000116147

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 175363016 - 175712670

 Exon Info From UCSC:
NM_003285

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40114168Full LengthBC129830tenascin R (restrictin, janusin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003276  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003285 NP_003276 Q92752 fn3
Fibrinogen_C
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
BC129830 AAI29831 A1L306
AK295823 BAG58640 B4DIX8
X98085 CAA66709 Q92752
Z67996 CAA91947 Q92752

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNR NP_003276 R.norvegicus Tnr 25567   NP_037177 93
M.musculus Tnr 21960 Gene Info NP_071707 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)