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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APOBEC3F, apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F
Sequence ID:NM_001006666
NM_145298
Entrez Gene ID:200316
Ensembl ID:ENSG00000128394

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 39436608 - 39442649

 Exon Info From UCSC:
NM_001006666
NM_145298

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5227163Full LengthBC038808apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660341  NP_001006667  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001006666 NP_001006667   APOBEC_N
NM_145298 NP_660341 Q8IUX4 APOBEC_C
APOBEC_N

Related Sequences

 
mRNAGenPeptSwissProt
BC038808 AAH38808 Q8IUX4
JF262037 AEA39617 F2YHL7
AK294810 BAG57929 B4DGW8
CR456395 CAG30281 Q8IUX4
CU012953 CAK54384  
CU013241 CAK54683  

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)