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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HAO2, Hydroxyacid oxidase 2 (long chain)
Sequence ID:NM_001005783
NM_016527
RefSeqGene ID:NG_011967
Entrez Gene ID:51179
Ensembl ID:ENSG00000116882

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3-p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 119911491 - 119936739

 Exon Info From UCSC:
NM_001005783
NM_016527

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4557798Full LengthBC020863hydroxyacid oxidase 2 (long chain)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005783  NP_057611  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001005783 NP_001005783 Q9NYQ3 EC 1.1.3.15 FMN_dh
NM_016527 NP_057611 Q9NYQ3 EC 1.1.3.15 FMN_dh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF203975 AAF14000 Q9NYQ3 EC 1.1.3.15
AF231917 AAF40200 Q9NYQ3 EC 1.1.3.15
BC020863 AAH20863 Q9NYQ3 EC 1.1.3.15
AY513277 AAT08030 Q9NYQ3 EC 1.1.3.15
DQ895163 ABM86089    
EU176321 ABW03772    
AK298289 BAG60549 Q5QP00  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HAO2 NP_001005783 R.norvegicus Hao2 84029   NP_114471 74
M.musculus Hao2 56185 Gene Info NP_062418 71
A.thaliana AT3G14150 820632   NP_001078152 49
A.thaliana AT3G14130 820630   NP_188029 47
S.cerevisiae CYB2 854950   NP_013658 40
N.crassa NCU08272 3878052   XP_961900 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)