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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCOR, BCL6 corepressor
Sequence ID:NM_001123383
NM_001123384
NM_001123385
NM_017745
NM_001130139
NM_020926
RefSeqGene ID:NG_008880
Entrez Gene ID:54880
Ensembl ID:ENSG00000183337

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MICROPHTHALMIA, SYNDROMIC 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 39911070 - 39956656

 Exon Info From UCSC:
NM_001123383
NM_001123384
NM_001123385
NM_017745

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4384724Full LengthBC114220BCL6 co-repressor
3905618IncompleteBC009675BCL6 co-repressor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060215  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001123383 NP_001116855    
NM_001123384 NP_001116856    
NM_001123385 NP_001116857 Q6W2J9  
NM_017745 NP_060215   Ank

Related Sequences

 
mRNAGenPeptSwissProt
AF317391 AAG41429 Q6W2J9
AF317392 AAG41430 Q6W2J9
BC009675 AAH09675 Q6W2J9
BC063536 AAH63536 Q6W2J9
BC114220 AAI14221 Q6W2J9
BC128387 AAI28388 A1A564
AY316592 AAR08265 Q6W2J9
AK000292 BAA91061 Q6W2J9
AB046795 BAB13401 Q6W2J9
AK074286 BAB85037 Q6W2J9
AK095360 BAG53034 B3KTC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCOR NP_001116857 M.musculus Bcor 71458 Gene Info NP_083786 89
R.norvegicus Bcor 317346   XP_002730239 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)