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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP6V1E2, ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2
Sequence ID:NM_080653
Entrez Gene ID:90423
Ensembl ID:ENSG00000250565

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 46738987 - 46746357

NM_080653 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
4910124673898746739950
101320254674608346747095

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3456620Full LengthBC008981ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2
5167103Full LengthBC034808ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542384  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080653 NP_542384 Q96A05 vATP-synt_E

Related Sequences

 
mRNAGenPeptSwissProt
BC008981 AAH08981 Q96A05
BC034808 AAH34808 Q96A05
HQ447099 ADQ31586  
AK058055 BAB71643 Q96A05
AB074759 BAC00847 Q96A05

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V1E2 NP_542384 M.musculus Atp6v1e2 74915 Gene Info NP_083397 79
R.norvegicus Atp6v1e2 366545   NP_001102449 78
A.thaliana VHA-E3 842725   NP_176602 44
A.thaliana TUF 826716   NP_192853 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)