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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACSM5, acyl-CoA synthetase medium-chain family member 5
Sequence ID:NM_017888
Entrez Gene ID:54988
Ensembl ID:ENSG00000183549

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 20420858 - 20452280

 Exon Info From UCSC:
NM_017888

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5261244Full LengthBC068516acyl-CoA synthetase medium-chain family member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060358  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017888 NP_060358 Q6NUN0 EC 6.2.1.2 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC013753 AAH13753 Q6NUN0 EC 6.2.1.2
BC016703 AAH16703 Q6NUN0 EC 6.2.1.2
BC068516 AAH68516 Q6NUN0 EC 6.2.1.2
AK000588 BAA91273 Q6NUN0 EC 6.2.1.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACSM5 NP_060358 M.musculus Acsm5 272428 Gene Info NP_848873 86
R.norvegicus Acsm5 361637   NP_001014184 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)