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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA10, Homeobox A10
Sequence ID:NM_152739
Entrez Gene ID:3206
Ensembl ID:ENSG00000253293

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27202056 - 27205129

NM_152739 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2114232720205727203459
142420762720449627205148

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4107013Full LengthBC013971homeobox A10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689952  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018951 NP_061824 P31260 Homeobox
NM_152739 NP_689952 P31269 Homeobox
Hox9_act

Related Sequences

 
mRNAGenPeptSwissProt
M30599 AAA36006 P31260
U82759 AAB40867 P31269
U41813 AAC50364 P31269
S69027 AAD14030 P31260
S69029 AAD14031 P31260
BC006537 AAH06537 P31269
BC007600 AAH07600 Q5I0Y5
BC010023 AAH10023 P31269
BC013971 AAH13971 P31260
BC071843 AAH71843 P31260
BC094807 AAH94807 P31260
BT006990 AAP35636 P31269
DQ891906 ABM82832  
DQ892748 ABM83674  
DQ895092 ABM86018  
DQ895994 ABM86962  
DQ896836 ABM87835  
AK312450 BAG35357 P31260
AM393527 CAL38404 P31269

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA10 NP_061824 M.musculus Hoxa10 15395 Gene Info NP_032289 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)