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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA3, homeobox A3
Sequence ID:NM_030661
NM_153631
NM_153632
Entrez Gene ID:3200
Ensembl ID:ENSG00000105997

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27146630 - 27166639

 Exon Info From UCSC:
NM_030661
NM_153631

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3905733Full LengthBC015180homeobox A3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705895  NP_109377  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030661 NP_109377 O43365 Homeobox
NM_153631 NP_705895 O43365 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC015180 AAH15180 O43365
DQ890972 ABM81898  
DQ894147 ABM85073  
AK056567 BAG51750 B3KPN8
AK094200 BAG52842 A4D182

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA3 NP_109377 M.musculus Hoxa3 15400 Gene Info NP_034582 94
R.norvegicus RGD1561431 500125   XP_002729357 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)