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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLR7, Toll-like receptor 7
Sequence ID:NM_016562
RefSeqGene ID:NG_012569
Entrez Gene ID:51284
Ensembl ID:ENSG00000196664

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 12903629 - 12906777

NM_016562 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1411288520112885241
421421288559912885699
14349911290363012908478

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5582912Full LengthBC033651toll-like receptor 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057646  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016562 NP_057646 Q9NYK1 LRR_1
TIR

Related Sequences

 
mRNAGenPeptSwissProt
AF240467 AAF60188 Q9NYK1
AF245702 AAF78035 Q9NYK1
BC033651 AAH33651 Q9NYK1
AY358292 AAQ88659 Q9NYK1
DQ891269 ABM82195  
DQ894457 ABM85383  
AK313858 BAG36586 B2R9N9
AB445659 BAG55056 B2R9N9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLR7 NP_057646 M.musculus Tlr7 170743 Gene Info NP_573474 81
R.norvegicus Tlr7 317468   NP_001091051 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta