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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LHFPL3, Lipoma HMGIC fusion partner-like 3
Sequence ID:NM_199000
Entrez Gene ID:375612
Ensembl ID:ENSG00000187416

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 103969334 - 104549001

NM_199000 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1569103969103103969671
570806104377121104377357
8073174104546633104549000

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40116045Full LengthBC129937lipoma HMGIC fusion partner-like 3
40116047Full LengthBC129938lipoma HMGIC fusion partner-like 3
40118480Full LengthBC129941lipoma HMGIC fusion partner-like 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199000 NP_945351 Q86UP9  

Related Sequences

 
mRNAGenPeptSwissProt
BC129937 AAI29938 A1L383
BC129938 AAI29939 A1L384
BC129941 AAI29942 A1L384
AY260763 AAP14954 Q86UP9
AK299759 BAG61648 A4D0Q5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LHFPL3 NP_945351 M.musculus Lhfpl3 269629 Gene Info NP_084266 100
R.norvegicus Lhfpl3 499977   XP_575331 100
A.gambiae AgaP_AGAP005724 1276397   XP_315740 43
D.melanogaster CG12026 38251   NP_647674 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)