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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC38A11, solute carrier family 38, member 11
Sequence ID:NM_001199148
NM_173512
Entrez Gene ID:151258
Ensembl ID:ENSG00000169507

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 165754811 - 165812035

Transcript StartTranscript EndChromosomal Start Chromosomal End
1429165754811165755239
430561165765149165765280
562674165768145165768257
675836165771621165771782
837907165772412165772482
908987165793859165793938
9881094165795959165796065
10951229165802102165802236
12301304165809216165809290
13051621165811718165812034

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40120878Full LengthBC125157solute carrier family 38, member 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775783  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199148 NP_001186077 Q08AI6  
NM_173512 NP_775783   Aa_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC125157 AAI25158 Q08AI6
AK097141 BAC04962 Q08AI6
AK293998 BAG57360 Q08AI6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC38A11 NP_001186077 M.musculus Slc38a11 320106 Gene Info NP_796048 85
R.norvegicus Slc38a11 362141   XP_342442 83
D.melanogaster CG13743 35911   NP_610444 39
A.gambiae AgaP_AGAP005983 1276656   XP_316026 39
S.cerevisiae AVT2 856645   NP_010850 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)