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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SSBP3, Single stranded DNA binding protein 3
Sequence ID:NM_001009955
NM_145716
NM_018070
Entrez Gene ID:23648
Ensembl ID:ENSG00000157216

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 54692353 - 54694451

 Exon Info From UCSC:
NM_001009955
NM_145716
NM_018070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3546126Full LengthBC003605single stranded DNA binding protein 3
6169677Full LengthBC066365single stranded DNA binding protein 3
3631555IncompleteBC004335single stranded DNA binding protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060540  NP_001009955  NP_663768  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001009955 NP_001009955   SSDP
NM_018070 NP_060540   SSDP
NM_145716 NP_663768 Q9BWW4 SSDP

Related Sequences

 
mRNAGenPeptSwissProt
BC003605 AAH03605 Q9BWW4
BC004335 AAH04335 Q9BT57
BC066365 AAH66365 Q9BWW4
AF500116 AAM22101 Q9BWW4
HQ448133 ADQ32614  
AK001217 BAA91561 Q9NW25
AK289474 BAF82163 Q9BWW4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SSBP3 NP_663768 M.musculus Ssbp3 72475 Gene Info NP_076161 100
R.norvegicus Ssbp3 84354   NP_445810 99
A.gambiae AgaP_AGAP010909 1271042   XP_001230651 72
D.melanogaster Ssdp 42177   NP_732305 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)