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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. APOBEC3D, Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D
Sequence ID:NM_152426
Entrez Gene ID:140564
Ensembl ID:ENSG00000243811

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 39417495 - 39429256

NM_152426 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14243941711739417540
4256173941882639419018
6188973942107439421353
89810123942156139421675
101311693942536739425523
117014493942769839427977
145025023942820239429254

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016554Full LengthBC153185apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D
100015580BC148619apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689639  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270411 NP_001257340    
NM_004900 NP_004891 Q9UH17 APOBEC_C
APOBEC_N
NM_152426 NP_689639 Q96AK3 APOBEC_C
APOBEC_N

Related Sequences

 
mRNAGenPeptSwissProt
U61083 AAD00089 Q9UH17
U61084 AAD00090 Q9UH17
BC053859 AAH53859 Q9UH17
BC148619 AAI48620  
BC153185 AAI53186  
AY743217 AAW31743 Q9UH17
EU527884 ACB32248 B2CML4
CR456396 CAG30282 Q6ICH2
CT841510 CAJ86440 Q20WL1
CU012951 CAK54382  
CU012954 CAK54385  
CU013031 CAK54462  
CU013239 CAK54681  
CU013242 CAK54684  
CU013319 CAK54761  

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)