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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCDHB14, Protocadherin beta 14
Sequence ID:NM_018934
RefSeqGene ID:NG_000017
Entrez Gene ID:56122
Ensembl ID:ENSG00000120327

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140603077 - 140605474

NM_018934 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12781140603077140605857

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40019185Full LengthBC099728protocadherin beta 14
40019180IncompleteBC098144protocadherin beta 14

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061757  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018934 NP_061757 Q9Y5E9 Cadherin
Cadherin_2

Related Sequences

 
mRNAGenPeptSwissProt
AF152493 AAD43754 Q9Y5E9
BC098144 AAH98144 Q9Y5E9
BC099728 AAH99728 Q9Y5E9
AF217744 AAK51612 Q9Y5E9
AK298296 BAG60554 B4DPE2
AK301346 BAG62894 B4DW32

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCDHB14 NP_061757 M.musculus Pcdhb20 93891 Gene Info NP_444375 79
R.norvegicus Pcdhb20 680203   NP_001102865 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)