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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLCC1, chloride channel CLIC-like 1
Sequence ID:NM_001048210
NM_015127
Entrez Gene ID:23155
Ensembl ID:ENSG00000121940

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 109472129 - 109493060

 Exon Info From UCSC:
NM_001048210
NM_015127

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3953674Full LengthBC002939chloride channel CLIC-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055942  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001048210 NP_001041675 Q96S66  
NM_013296 NP_037428 P81274 TPR_1
GoLoco
NM_015127 NP_055942   MCLC

Related Sequences

 
mRNAGenPeptSwissProt
U54999 AAB40385 P81274
BC002939 AAH02939 Q96S66
BC027732 AAH27732 P81274
AY136740 AAN01266 P81274
DQ892029 ABM82955  
DQ892699 ABM83625  
DQ894930 ABM85856  
DQ895941 ABM86867  
AB018304 BAA34481 Q96S66
AB052915 BAB59018 Q96S66
AB052916 BAB79261 Q96S66
AB052917 BAB79262 Q96S66
AB052918 BAB79263 Q96S66
AK314249 BAG36915 B2RAL8
AK090563 BAG52186 B3KQX4
AK295563 BAG58463 B4DIF1
AB445462 BAH84760 P81274
CR456786 CAG33067 P81274

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLCC1 NP_001041675 R.norvegicus Clcc1 170927   NP_596905 75
M.musculus Clcc1 229725 Gene Info NP_001171241 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)