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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LHX4, LIM homeobox 4
Sequence ID:NM_033343
RefSeqGene ID:NG_008081
Entrez Gene ID:89884
Ensembl ID:ENSG00000121454

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PITUITARY HORMONE DEFICIENCY, COMBINED, 4 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 180240513 - 180244088

NM_033343 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1299180199441180199739
300471180217419180217590
472674180235526180235728
675829180240514180240668
8301001180240969180241140
10021870180243319180244187

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3529089Full LengthBC011759LIM homeobox 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_203129  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033343 NP_203129 Q969G2 Homeobox
LIM

Related Sequences

 
mRNAGenPeptSwissProt
BC011759 AAH11759 Q969G2
AF282899 AAK69169 Q969G2
AF179849 AAK70923 Q969G2
AY053457 AAL07260 Q969G2
DQ892904 ABM83830  
DQ896155 ABM87154  
AB055703 BAB62817 Q969G2
AB055704 BAB62818 Q96JP7
AB037683 BAC01272 Q969G2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LHX4 NP_203129 M.musculus Lhx4 16872 Gene Info NP_034842 99
R.norvegicus Lhx4 360858   NP_001101818 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)