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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GINS1, GINS complex subunit 1 (Psf1 homolog)
Sequence ID:NM_021067
Entrez Gene ID:9837
Ensembl ID:ENSG00000101003

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 25388364 - 25426978

NM_021067 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12092538832225388530
2102742539442525394489
2753732539773925397837
3744642539874025398830
4655812540584625405962
5826562542233725422411
65732892542655825429190

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4333095Full LengthBC012542GINS complex subunit 1 (Psf1 homolog)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066545  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021067 NP_066545 Q14691 Psf1

Related Sequences

 
mRNAGenPeptSwissProt
BC012542 AAH12542 Q14691
D80008 BAA11503 Q14691
AK294593 BAG57781 B4DGH0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GINS1 NP_066545 R.norvegicus Gins1 499914   NP_001102677 94
M.musculus Gins1 69270 Gene Info NP_081290 93
D.melanogaster Psf1 38136   NP_612086 53
A.gambiae AgaP_AGAP010835 1271127   XP_309873 49
C.elegans R53.6 187885   NP_496153 41
A.thaliana PSF1 844359   NP_178136 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)